ENSG00000139547
ENSEMBL
O75452
Uniprot
8608
NCBI
HGNC:29674
HGNC
ENSG00000139547-RDH16
Protein Atlas
975
Number of nucleotide sites
76 / 190
Orthologues in available genomes
Busco ID:
Missing in mammalia_odb10 Lineage
| A | C | G | T |
|---|---|---|---|
| 0.2122 | 0.2579 | 0.3081 | 0.2218 |
| A | C | G | T | |
|---|---|---|---|---|
| A | 1.7666 | 5.5048 | 1.8039 | |
| C | 1.7666 | 1.1479 | 5.5341 | |
| G | 5.5048 | 1.1479 | 1 | |
| T | 1.8039 | 5.5341 | 1 |
| Relative evolutionary rate (using ERaBLE) | 1.34321 |
| Total Branch Length (TBL) | 4.109 |
| % of G+C in third codon positions | 69 |
| Shape parameter of the gamma distribution | 0.6807 |
| 70 | % of the sites are variable |
| 31 | % are at first codon positions |
| 25 | % are at second codon positions |
| 44 | % are at third codon positions |
| Species | Superorder | gene_identifier | chromosome | strand | length | start | end | transcript |
|---|---|---|---|---|---|---|---|---|
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Species | Superorder | gene_identifier | chromosome | strand | length | start | end | transcript |
|---|---|---|---|---|---|---|---|---|
| Chrysochloris_asiatica | Afrotheria | No similar 1-to-1 orthologue found | ||||||
| Echinops_telfairi | Afrotheria | No similar 1-to-1 orthologue found | ||||||
| Elephantulus_edwardii | Afrotheria | No similar 1-to-1 orthologue found | ||||||
| Elephas_maximus_indicus | Afrotheria | No similar 1-to-1 orthologue found | ||||||
| Loxodonta_africana | Afrotheria | No similar 1-to-1 orthologue found | ||||||
| Orycteropus_afer_afer | Afrotheria | 103204843 | NA | -1 | 657 | 113561 | 216711 | XM_007950068.1 |
| Trichechus_manatus_latirostris | Afrotheria | No similar 1-to-1 orthologue found | ||||||
| Aotus_nancymaae | Euarchontes | No similar 1-to-1 orthologue found | ||||||
| Carlito_syrichta | Euarchontes | No similar 1-to-1 orthologue found | ||||||
| Cercocebus_atys | Euarchontes | No similar 1-to-1 orthologue found | ||||||
| Colobus_angolensis_palliatus | Euarchontes | No similar 1-to-1 orthologue found | ||||||
| Gorilla_gorilla_gorilla | Euarchontes | No similar 1-to-1 orthologue found | ||||||
| Lemur_catta | Euarchontes | No similar 1-to-1 orthologue found | ||||||
| Macaca_fascicularis | Euarchontes | No similar 1-to-1 orthologue found | ||||||
| Macaca_nemestrina | Euarchontes | No similar 1-to-1 orthologue found | ||||||
| Mandrillus_leucophaeus | Euarchontes | No similar 1-to-1 orthologue found | ||||||
| Microcebus_murinus | Euarchontes | No similar 1-to-1 orthologue found | ||||||
| Otolemur_garnettii | Euarchontes | No similar 1-to-1 orthologue found | ||||||
| Pan_paniscus | Euarchontes | No similar 1-to-1 orthologue found | ||||||
| Pan_troglodytes | Euarchontes | No similar 1-to-1 orthologue found | ||||||
| Propithecus_coquereli | Euarchontes | No similar 1-to-1 orthologue found | ||||||
| Rhinopithecus_roxellana | Euarchontes | No similar 1-to-1 orthologue found | ||||||
| Saimiri_boliviensis_boliviensis | Euarchontes | 101027950 | NA | -1 | 954 | 71310961 | 71316032 | XM_003926452.3 |
| Trachypithecus_francoisi | Euarchontes | No similar 1-to-1 orthologue found | ||||||
| Tupaia_chinensis | Euarchontes | No similar 1-to-1 orthologue found | ||||||
| Callithrix_jacchus | Euarchontoglires | 100388476 | 9 | 1 | 1017 | 60296800 | 60301875 | XM_002752622.6 |
| Cebus_imitator | Euarchontoglires | 108309707 | NA | -1 | 954 | 2955326 | 2960704 | XM_017536158.1 |
| Chlorocebus_sabaeus | Euarchontoglires | 103238546 | NA | 1 | 954 | 193120875 | 193127224 | XM_008003718.2 |
| Dipodomys_ordii | Euarchontoglires | 105988466 | NA | -1 | 951 | 2175680 | 2182679 | XM_013020098.1 |
| Dipodomys_spectabilis | Euarchontoglires | 122124073 | NA | 1 | 1029 | 17199452 | 17209167 | XM_042698722.1 |
| Fukomys_damarensis | Euarchontoglires | 104876541 | NA | -1 | 963 | 23413401 | 23423291 | XM_010644643.3 |
| Galeopterus_variegatus | Euarchontoglires | 103592685 | NA | -1 | 957 | 403553 | 409305 | XM_008575499.1 |
| Homo_sapiens | Euarchontoglires | 8608 | 12 | -1 | 954 | 56951431 | 56957608 | NM_003708.5 |
| Hylobates_moloch | Euarchontoglires | 116480888 | NA | 1 | 954 | 48000529 | 48008429 | XM_032173331.1 |
| Macaca_mulatta | Euarchontoglires | 713672 | 11 | -1 | 954 | 56481336 | 56487508 | NM_001194686.1 |
| Macaca_thibetana_thibetana | Euarchontoglires | 126930397 | 11 | -1 | 954 | 53218410 | 53225339 | XM_050747351.1 |
| Marmota_flaviventris | Euarchontoglires | 114085338 | NA | 1 | 954 | 23140962 | 23147688 | XM_027926519.2 |
| Marmota_marmota_marmota | Euarchontoglires | 107140153 | NA | 1 | 963 | 48870699 | 48877949 | XM_048806950.1 |
| Marmota_monax | Euarchontoglires | 124108271 | NA | 1 | 1023 | 2513209 | 2520486 | XM_046466703.1 |
| Mesocricetus_auratus | Euarchontoglires | 121143254 | NA | -1 | 954 | 44259068 | 44266324 | XM_040754726.1 |
| Mus_musculus | Euarchontoglires | 19683 | 10 | 1 | 954 | 127636959 | 127651715 | XM_006513389.3 |
| Nomascus_leucogenys | Euarchontoglires | 100605686 | 11 | 1 | 954 | 54307039 | 54314956 | XM_003252788.3 |
| Papio_anubis | Euarchontoglires | 101005769 | 9 | -1 | 951 | 51410555 | 51416369 | XM_021922522.2 |
| Perognathus_longimembris_pacificus | Euarchontoglires | 125354352 | 1 | 1 | 966 | 44880945 | 44888187 | XM_048349957.1 |
| Piliocolobus_tephrosceles | Euarchontoglires | 111541829 | 10 | -1 | 954 | 54007837 | 54016772 | XM_023210740.1 |
| Pongo_abelii | Euarchontoglires | 100461166 | 12 | -1 | 954 | 54747999 | 54754857 | XM_002823411.3 |
| Rhinopithecus_bieti | Euarchontoglires | 108519681 | NA | 1 | 840 | 691374 | 712172 | XM_017858849.1 |
| Sapajus_apella | Euarchontoglires | 116559426 | NA | 1 | 954 | 19733351 | 19738531 | XM_032290231.1 |
| Theropithecus_gelada | Euarchontoglires | 112635490 | 11 | -1 | 954 | 15979392 | 15988654 | XM_025403660.1 |
| Urocitellus_parryii | Euarchontoglires | 113189548 | NA | -1 | 954 | 1680335 | 1687520 | XM_026398389.1 |
| Acomys_russatus | Glires | No similar 1-to-1 orthologue found | ||||||
| Apodemus_sylvaticus | Glires | No similar 1-to-1 orthologue found | ||||||
| Arvicanthis_niloticus | Glires | No similar 1-to-1 orthologue found | ||||||
| Arvicola_amphibius | Glires | No similar 1-to-1 orthologue found | ||||||
| Castor_canadensis | Glires | No similar 1-to-1 orthologue found | ||||||
| Cavia_porcellus | Glires | No similar 1-to-1 orthologue found | ||||||
| Chinchilla_lanigera | Glires | No similar 1-to-1 orthologue found | ||||||
| Cricetulus_griseus | Glires | No similar 1-to-1 orthologue found | ||||||
| Grammomys_surdaster | Glires | No similar 1-to-1 orthologue found | ||||||
| Heterocephalus_glaber | Glires | No similar 1-to-1 orthologue found | ||||||
| Ictidomys_tridecemlineatus | Glires | No similar 1-to-1 orthologue found | ||||||
| Jaculus_jaculus | Glires | No similar 1-to-1 orthologue found | ||||||
| Mastomys_coucha | Glires | No similar 1-to-1 orthologue found | ||||||
| Meriones_unguiculatus | Glires | No similar 1-to-1 orthologue found | ||||||
| Microtus_fortis | Glires | No similar 1-to-1 orthologue found | ||||||
| Microtus_ochrogaster | Glires | No similar 1-to-1 orthologue found | ||||||
| Microtus_oregoni | Glires | No similar 1-to-1 orthologue found | ||||||
| Mus_caroli | Glires | No similar 1-to-1 orthologue found | ||||||
| Mus_pahari | Glires | No similar 1-to-1 orthologue found | ||||||
| Myodes_glareolus | Glires | No similar 1-to-1 orthologue found | ||||||
| Nannospalax_galili | Glires | No similar 1-to-1 orthologue found | ||||||
| Ochotona_curzoniae | Glires | No similar 1-to-1 orthologue found | ||||||
| Ochotona_princeps | Glires | No similar 1-to-1 orthologue found | ||||||
| Octodon_degus | Glires | No similar 1-to-1 orthologue found | ||||||
| Onychomys_torridus | Glires | No similar 1-to-1 orthologue found | ||||||
| Oryctolagus_cuniculus | Glires | No similar 1-to-1 orthologue found | ||||||
| Peromyscus_californicus_insignis | Glires | No similar 1-to-1 orthologue found | ||||||
| Peromyscus_leucopus | Glires | No similar 1-to-1 orthologue found | ||||||
| Peromyscus_maniculatus_bairdii | Glires | No similar 1-to-1 orthologue found | ||||||
| Phodopus_roborovskii | Glires | No similar 1-to-1 orthologue found | ||||||
| Rattus_norvegicus | Glires | No similar 1-to-1 orthologue found | ||||||
| Rattus_rattus | Glires | No similar 1-to-1 orthologue found | ||||||
| Acinonyx_jubatus | Laurasiatheria | 106975845 | NA | 1 | 1368 | 57706769 | 57714067 | XM_027071447.1 |
| Ailuropoda_melanoleuca | Laurasiatheria | 100475207 | 15 | -1 | 1047 | 34089201 | 34097284 | XM_034644308.1 |
| Artibeus_jamaicensis | Laurasiatheria | 119062529 | NA | 1 | 1065 | 73265 | 91812 | XM_037163526.1 |
| Balaenoptera_acutorostrata_scammoni | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Balaenoptera_musculus | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Bison_bison_bison | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Bos_indicus | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Bos_mutus | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Bos_taurus | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Bubalus_bubalis | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Budorcas_taxicolor | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Callorhinus_ursinus | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Camelus_bactrianus | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Camelus_dromedarius | Laurasiatheria | 105098298 | 12 | -1 | 1068 | 390303 | 419781 | XM_031462234.1 |
| Camelus_ferus | Laurasiatheria | 102511811 | 12 | -1 | 954 | 22585908 | 22592675 | XM_006182239.3 |
| Canis_lupus_dingo | Laurasiatheria | 112677996 | 10 | -1 | 1275 | 1386830 | 1396322 | XM_025476913.3 |
| Capra_hircus | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Ceratotherium_simum_simum | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Cervus_canadensis | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Cervus_elaphus | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Condylura_cristata | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Delphinapterus_leucas | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Desmodus_rotundus | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Enhydra_lutris_kenyoni | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Eptesicus_fuscus | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Equus_asinus | Laurasiatheria | 106832982 | 22 | 1 | 1008 | 11550491 | 11563306 | XM_044755981.1 |
| Equus_caballus | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Equus_przewalskii | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Equus_quagga | Laurasiatheria | 124249987 | 1 | 1 | 687 | 11470742 | 11474710 | XM_046681647.1 |
| Erinaceus_europaeus | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Eumetopias_jubatus | Laurasiatheria | 114214969 | NA | -1 | 954 | 1240966 | 1248499 | XM_028110859.1 |
| Felis_catus | Laurasiatheria | 101088854 | B4 | -1 | 1035 | 83343827 | 83351405 | XM_003988922.6 |
| Globicephala_melas | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Halichoerus_grypus | Laurasiatheria | 118537183 | NA | -1 | 954 | 156361 | 162872 | XM_036094576.1 |
| Hipposideros_armiger | Laurasiatheria | 109396907 | NA | -1 | 954 | 1224521 | 1233586 | XM_019669147.1 |
| Hyaena_hyaena | Laurasiatheria | 120224882 | NA | -1 | 954 | 114626 | 121342 | XM_039223132.1 |
| Lagenorhynchus_obliquidens | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Leopardus_geoffroyi | Laurasiatheria | 123590549 | B4 | -1 | 1035 | 83910122 | 83917369 | XM_045463795.1 |
| Leptonychotes_weddellii | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Lipotes_vexillifer | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Lontra_canadensis | Laurasiatheria | 116877681 | NA | -1 | 954 | 1631164 | 1638878 | XM_032874514.1 |
| Lynx_canadensis | Laurasiatheria | 115519173 | B4 | -1 | 1167 | 82845081 | 82852238 | XM_030322964.1 |
| Manis_javanica | Laurasiatheria | 108402617 | NA | 1 | 1074 | 29361592 | 29367063 | XM_036992359.1 |
| Manis_pentadactyla | Laurasiatheria | 118917280 | NA | 1 | 954 | 9190209 | 9195678 | XM_036894914.1 |
| Meles_meles | Laurasiatheria | 123945838 | 7 | -1 | 1086 | 96754052 | 96762250 | XM_046010775.1 |
| Miniopterus_natalensis | Laurasiatheria | 107546157 | NA | 1 | 966 | 4414540 | 4423346 | XM_016224432.1 |
| Mirounga_angustirostris | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Mirounga_leonina | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Molossus_molossus | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Monodon_monoceros | Laurasiatheria | 114886165 | NA | -1 | 732 | 42988466 | 42992570 | XM_029206715.1 |
| Mustela_erminea | Laurasiatheria | 116593952 | 6 | -1 | 1134 | 93279106 | 93287684 | XM_032348707.1 |
| Mustela_putorius_furo | Laurasiatheria | 101674025 | NA | -1 | 1023 | 2320995 | 2327612 | XM_045071680.1 |
| Myotis_brandtii | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Myotis_davidii | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Myotis_lucifugus | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Myotis_myotis | Laurasiatheria | 118651285 | NA | 1 | 954 | 157493644 | 157502898 | XM_036300275.1 |
| Neogale_vison | Laurasiatheria | 122891183 | 12 | -1 | 954 | 100972265 | 100979919 | XM_044226673.1 |
| Neomonachus_schauinslandi | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Neophocaena_asiaeorientalis_asiaeorientalis | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Odobenus_rosmarus_divergens | Laurasiatheria | 101373444 | NA | -1 | 954 | 1298761 | 1305655 | XM_004401697.1 |
| Odocoileus_virginianus_texanus | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Orcinus_orca | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Oryx_dammah | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Ovis_aries | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Panthera_leo | Laurasiatheria | 122224720 | B4 | -1 | 954 | 82952944 | 82961464 | XM_042946919.1 |
| Panthera_pardus | Laurasiatheria | 109270353 | NA | -1 | 954 | 1990685 | 1999770 | XM_019454833.1 |
| Panthera_tigris | Laurasiatheria | 102948540 | B4 | -1 | 954 | 82571450 | 82579987 | XM_042992564.1 |
| Panthera_uncia | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Phoca_vitulina | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Phocoena_sinus | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Phyllostomus_discolor | Laurasiatheria | 114512632 | 2 | 1 | 954 | 160538280 | 160564720 | XM_028531564.2 |
| Phyllostomus_hastatus | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Physeter_catodon | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Pipistrellus_kuhlii | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Prionailurus_bengalensis | Laurasiatheria | 122473793 | B4 | -1 | 1035 | 83220779 | 83228015 | XM_043564513.1 |
| Pteropus_alecto | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Pteropus_giganteus | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Pteropus_vampyrus | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Puma_concolor | Laurasiatheria | 112863475 | NA | -1 | 1035 | 2368837 | 2386077 | XM_025926599.1 |
| Puma_yagouaroundi | Laurasiatheria | 121040899 | NA | 1 | 1035 | 59217685 | 59224926 | XM_040491672.1 |
| Rhinolophus_ferrumequinum | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Rousettus_aegyptiacus | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Sorex_araneus | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Sturnira_hondurensis | Laurasiatheria | 118976010 | NA | 1 | 1062 | 2974314 | 2992844 | XM_037030275.1 |
| Suncus_etruscus | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Suricata_suricatta | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Sus_scrofa | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Talpa_occidentalis | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Tursiops_truncatus | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Ursus_americanus | Laurasiatheria | 123787232 | NA | 1 | 954 | 12465863 | 12473326 | XM_045789804.1 |
| Ursus_arctos | Laurasiatheria | 113256401 | NA | -1 | 1020 | 2256355 | 2263768 | XM_026500222.3 |
| Ursus_maritimus | Laurasiatheria | 103656387 | NA | -1 | 1020 | 1154168 | 1161326 | XM_040637151.1 |
| Vicugna_pacos | Laurasiatheria | No similar 1-to-1 orthologue found | ||||||
| Vulpes_lagopus | Laurasiatheria | 121492160 | 5 | 1 | 954 | 68487991 | 68495447 | XM_041757489.1 |
| Vulpes_vulpes | Laurasiatheria | 112922365 | NA | 1 | 954 | 15153100 | 15165007 | XM_026001907.1 |
| Zalophus_californianus | Laurasiatheria | 113922481 | 9 | 1 | 1266 | 57581001 | 57594691 | XM_027594420.2 |
| Antechinus_flavipes | Marsupialia | 127539158 | 5 | 1 | 954 | 218351066 | 218358072 | XM_051963193.1 |
| Dromiciops_gliroides | Marsupialia | 122729940 | 5 | -1 | 963 | 225875966 | 225890973 | XM_043969087.1 |
| Gracilinanus_agilis | Marsupialia | 123250572 | 5 | 1 | 954 | 282557686 | 282569989 | XM_044679712.1 |
| Monodelphis_domestica | Marsupialia | 100011050 | NA | -1 | 954 | 17397 | 29780 | XM_007506235.2 |
| Phascolarctos_cinereus | Marsupialia | 110210954 | NA | -1 | 954 | 1837472 | 1848197 | XM_020990080.1 |
| Sarcophilus_harrisii | Marsupialia | 100929601 | 5 | 1 | 984 | 83647369 | 83656564 | XM_031941138.1 |
| Trichosurus_vulpecula | Marsupialia | 118850338 | 5 | 1 | 969 | 265377188 | 265391423 | XM_036759658.1 |
| Vombatus_ursinus | Marsupialia | 114037919 | NA | 1 | 954 | 3373411 | 3384512 | XM_027854923.1 |
| Ornithorhynchus_anatinus | Monotremata | No similar 1-to-1 orthologue found | ||||||
| Tachyglossus_aculeatus | Monotremata | No similar 1-to-1 orthologue found | ||||||
| Choloepus_didactylus | Xenarthra | No similar 1-to-1 orthologue found | ||||||
| Dasypus_novemcinctus | Xenarthra | 101441792 | NA | -1 | 744 | 1733641 | 1740000 | XM_012528148.2 |